plate-reader

Parsley- a web app for parsing data from plate readers

As demand for the automation of biological assays has increased over recent years, the range of measurement types implemented by multiwell plate readers has broadened and the list of published software packages that caters to their analysis has …

Parsley is a universal plate reader data parsing application.

Multiwell plate readers are an important tool in the life sciences. They are frequently used to measure fluorescence, absorbance and luminescence, among other measurement types. As they are heavily used for high-throughput assays and screens, their …

Absolute protein quantification using fluorescence measurements with FPCountR

This paper presents a generalisable method for the calibration of fluorescence readings on microplate readers, in order to convert arbitrary fluorescence units into absolute units. FPCountR relies on the generation of bespoke fluorescent protein (FP) …

FPCountR- improved analytical methods enable absolute protein quantification

Contributed abstract to the 14th International Workshop on Bio-Design Automation, Paris, France, October 24th-26th 2022.

Beyond fluorescein- Use of fluorescent protein calibrants for direct and absolute quantification of protein production in synthetic biology.

FPCount protocol - in-lysate (purification free) protocol

FPCount is a complete protocol for fluorescent protein calibration, consisting of 1. FP expression and production of cell lysates. 2. FP concentration determination in a microplate reader. 3. FP fluorescence quantification in a microplate reader. …

FPCountR- Fluorescent protein calibration for plate readers

The R package FPCountR enables the calibration of microplate readers using fluorescent protein calibrants. This enables users to monitor cellular fluorescent protein expression in absolute units. More information is available on the GitHub page …